Welcome to Python USI submission REST API’s documentation!¶

Contents:

  • Python USI submission REST API
    • Features
    • API Endpoints
    • Credits
  • Installation
    • Stable release
    • From sources
  • Usage
    • Creating an Auth object
    • Creating an USI User
    • Creating a Team
      • Add Profile to Domain
    • Adding User to Team
    • Create a Submission
      • Add Samples to a Submission
    • Check and finalize a Submission
      • Querying for biosample validation status
      • Checking errors
      • Finalize a Submission
    • Fetch a submission by name
    • Get Sample from a submission
  • Advanced Usage
    • Retrieving Submission Objects
    • Working with samples
  • pyUSIrest
    • pyUSIrest package
      • Submodules
      • pyUSIrest.auth module
      • pyUSIrest.client module
      • pyUSIrest.exceptions module
      • pyUSIrest.settings module
      • pyUSIrest.usi module
      • Module contents
  • Contributing
    • Types of Contributions
      • Report Bugs
      • Fix Bugs
      • Implement Features
      • Write Documentation
      • Submit Feedback
    • Get Started!
    • Pull Request Guidelines
    • Tips
    • Deploying
  • Credits
    • Development Lead
    • Contributors
  • History
    • TODO
    • 0.3.1 (2020-01-27)
    • 0.3.0 (2020-01-14)
      • Features
    • 0.2.2 (2019-03-28)
      • Features
    • 0.2.1 (2019-01-15)
      • Features
    • 0.2.0 (2018-10-23)
      • Features
    • 0.1.0 (2018-10-17)
      • Features

Indices and tables¶

  • Index
  • Module Index
  • Search Page

Python USI submission REST API

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Contents:

  • Python USI submission REST API
  • Installation
  • Usage
  • Advanced Usage
  • pyUSIrest
  • Contributing
  • Credits
  • History

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